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320 Commits

Author SHA1 Message Date
Raul Ochoa
a222341863 Merge pull request #59 from CartoDB/kmeans 
KMeans clustering and weighted centroid analysis
 2016-06-16 12:39:13 +02:00
Andy Eschbacher
4834ee2f42 adding higher numpy version 2016-06-15 11:36:19 -04:00
Andy Eschbacher
bbe22d0b4d new bounds for accuracy in tests 2016-06-15 11:36:04 -04:00
Rafa de la Torre
75531b671e Remove virtualenv references from READMEs #60 2016-06-14 18:24:43 +02:00
Rafa de la Torre
0acae8240f Remove virtualenv stuff from Makefiles #60 2016-06-14 18:23:30 +02:00
Rafa de la Torre
7b98415da3 Remove virtualenv activation #60 2016-06-14 18:06:23 +02:00
abelvm
5a2319db72 remove garbage 2016-06-14 18:01:03 +02:00
abelvm
9db4b7f519 first commit 2016-06-14 17:55:45 +02:00
Raul Ochoa
fd1862167c Remove trailing space 2016-06-13 13:06:21 +02:00
Raul Ochoa
c870f68c77 Revert "Declare scipy as dep" 
This reverts commit 1e8bc12e0a.
 2016-06-13 13:05:50 +02:00
Raul Ochoa
1e8bc12e0a Declare scipy as dep 2016-06-13 12:17:46 +02:00
Raul Ochoa
b33ba2d294 Do not use names for the aggregate params 2016-06-10 18:24:43 +02:00
Raul Ochoa
889cd5c579 Fix scikit-learn dep name 2016-06-10 17:47:46 +02:00
Stuart Lynn
1a4944b960 adding sklearn as a dep 2016-06-10 13:16:16 +00:00
Stuart Lynn
9d3de5a8ef adding not null filter for geom on kmeans 2016-06-10 13:12:55 +00:00
Stuart Lynn
7f3b23f67a reworking CDB_WeightedMean to be an aggregate function 2016-06-10 13:06:49 +00:00
Andy Eschbacher
69f08c4b78 updated tests to check for percent diffs 2016-06-08 11:26:32 -04:00
Ubuntu
4e86965f03 KMeans clustering and weighted centroid analysis 2016-06-07 19:58:32 +00:00
Andy Eschbacher
d41e28bc6f pylint corrections 2016-06-06 09:26:52 -04:00
Andy Eschbacher
1f73be2752 rename functions -> trend 2016-06-06 08:46:13 -04:00
abelvm
5183f5ff92 added function overload with subqueries input 2016-06-03 18:22:26 +02:00
abelvm
73d38bbbaa filling the gaps 2016-06-03 17:32:39 +02:00
Andy Eschbacher
e7de471ac8 adds expectation values for tests 2016-06-03 11:06:48 -04:00
Andy Eschbacher
14d50facda adds test that expects all null values returned 2016-06-03 11:06:29 -04:00
Andy Eschbacher
5e8d11fce2 adds fixtures for spatial markov tests 2016-06-03 11:02:51 -04:00
Andy Eschbacher
183a0f9604 comment out unneeded code whch w.transform handles 2016-06-03 11:01:53 -04:00
Andy Eschbacher
fc3a7e3d78 add casting to function call 2016-06-03 11:01:20 -04:00
Stuart Lynn
4782d39849 stubbing out gravity model 2016-06-03 10:36:21 -04:00
Andy Eschbacher
c0dfaa8341 adds test for spatial markov sql function 2016-06-02 16:19:15 -04:00
Andy Eschbacher
edf635886b updates column name to rowid 2016-06-02 14:19:13 -04:00
Andy Eschbacher
971c8f75d8 Merge branch 'develop' into add-spatial-markov 2016-06-02 12:59:49 -04:00
Andy Eschbacher
54d35c614b adds tests passing for spatial_markov 2016-06-02 12:52:34 -04:00
Andy Eschbacher
d1a267febb adding number of classes options 2016-06-02 12:51:01 -04:00
Andy Eschbacher
0eb3db3c1d adding fixtures 2016-06-02 12:12:52 -04:00
Andy Eschbacher
7a7cbcf33f adds test for get_time_data 2016-06-02 09:49:09 -04:00
Andy Eschbacher
c04e15ef81 rename some variables 2016-06-01 15:07:16 -04:00
Andy Eschbacher
59c520da16 renaming output value to vals 2016-06-01 13:40:32 -04:00
Andy Eschbacher
90c3e21c0d renaming output id to rowid 2016-06-01 12:43:33 -04:00
Andy Eschbacher
3013998e1b make functions more flexible to case of weight type 2016-06-01 12:19:08 -04:00
Andy Eschbacher
2b8adb744d switched signature to put more common options in the front 2016-06-01 12:09:43 -04:00
Andy Eschbacher
b5c6b42081 update names to align with CamelCase convention 2016-06-01 11:33:02 -04:00
Andy Eschbacher
408e34cd38 newline 2016-05-26 10:53:33 -04:00
Andy Eschbacher
e80fdca7fc removing time-binning options, reorganizes signature 2016-05-25 12:02:47 -04:00
Andy Eschbacher
fd7aa4140a change function name to match requirements 2016-05-25 12:01:55 -04:00
Andy Eschbacher
7a1eb6b9b6 adding debug to mock plpy 2016-05-25 11:03:58 -04:00
Andy Eschbacher
1b0d1cc82c updating function names 2016-05-24 17:51:29 -04:00
Andy Eschbacher
4e870e4393 adapt other test for new settings in fixtures 2016-05-20 15:15:41 -04:00
Andy Eschbacher
b05ad98ed9 adding tests for hot/cold/outlier for normal moran functions 2016-05-20 15:15:19 -04:00
Andy Eschbacher
bc8055a12b adds pset format unaligned to reduce output for tests 2016-05-20 14:55:16 -04:00
Andy Eschbacher
c3913459d9 adding tests for hotspot, coldspot, and outlier functions 2016-05-20 14:54:42 -04:00
Andy Eschbacher
f571e59a95 adding hot/cold/outlier getters 2016-05-20 14:05:59 -04:00
Andy Eschbacher
c44434ef08 adding fixture for markov testing 2016-04-01 08:24:33 -04:00
Andy Eschbacher
95247f66bb updating test info 2016-04-01 08:24:09 -04:00
Andy Eschbacher
9ba9d07bb5 building tests for markov 2016-04-01 08:23:46 -04:00
Andy Eschbacher
ef475adc26 testing array outputs 2016-04-01 08:23:10 -04:00
Andy Eschbacher
3294eb35ab remove if conditions and relying on pysal.W to build weights norms 2016-04-01 08:22:27 -04:00
Andy Eschbacher
693f6a68db pylint suggested changes 2016-03-31 11:26:33 -04:00
Andy Eschbacher
fd76a509ea Merge branch 'add-spatial-markov' of https://github.com/CartoDB/crankshaft into add-spatial-markov 2016-03-31 10:29:14 -04:00
Andy Eschbacher
c18baf26d8 adding module refs for pysaul utils 2016-03-31 09:35:10 -04:00
Andy Eschbacher
314d1851db fix tests for array-based inputs 2016-03-31 09:29:51 -04:00
Andy Eschbacher
6165d5e61e restructure to accom list of time columns 2016-03-31 09:27:37 -04:00
Andy Eschbacher
7695102500 update error message 2016-03-30 16:10:53 -04:00
Andy Eschbacher
369d1d2f41 pylinting changes 2016-03-30 16:10:53 -04:00
Andy Eschbacher
e32bab3f88 removed pieces for pysal_utils 2016-03-30 16:10:34 -04:00
Andy Eschbacher
cd3790860a add working version 2016-03-30 16:09:37 -04:00
Andy Eschbacher
1de90a7d39 update output signature 2016-03-30 16:09:37 -04:00
Andy Eschbacher
9535506b93 formated markov sql file a bit 2016-03-30 16:09:37 -04:00
Andy Eschbacher
bae2f04955 update signature used in plpython function 2016-03-30 16:09:37 -04:00
Andy Eschbacher
dc0873cd2b add types to arrays 2016-03-30 16:09:37 -04:00
Andy Eschbacher
d4621a6e9c adding passing tests 2016-03-30 16:09:37 -04:00
Andy Eschbacher
9943d4de58 adding markov python code 2016-03-30 16:08:17 -04:00
Andy Eschbacher
8cccb18eed adding markov functionality 2016-03-30 16:08:17 -04:00
Andy Eschbacher
a0cb699b1a updated move to pysal-utils 2016-03-30 16:06:44 -04:00
Andy Eschbacher
ea02f36235 adding condition to avoid self-comparison in neighbor queries 2016-03-30 15:37:51 -04:00
Andy Eschbacher
22b6aed7c1 Merge pull request #16 from CartoDB/proof-read-and-gitignore-update 
Proof read and gitignore update
 2016-03-30 12:37:29 -04:00
Andy Eschbacher
02b74813ac add test for global moran 2016-03-30 12:09:49 -04:00
Andy Eschbacher
4c243bf1d3 correct func signatures 2016-03-30 11:44:44 -04:00
Andy Eschbacher
b0150d4fec adding tests for pysal_utils 2016-03-30 08:27:14 -04:00
Andy Eschbacher
6bb4f36df5 extracting util code to new submodule 2016-03-30 08:10:35 -04:00
Andy Eschbacher
5a46f65e59 update tests to remove plpy notices 2016-03-30 08:09:48 -04:00
Andy Eschbacher
e56519f599 removed unneded comments, make outputs more consistent 2016-03-29 23:39:29 -07:00
Andy Eschbacher
8dd8ab37a5 refactored from pylint 2016-03-29 22:49:31 -07:00
Andy Eschbacher
06f5cf9951 standarizing error reporting 2016-03-29 12:34:23 -07:00
Andy Eschbacher
bc67ae8f69 changed name of functions for observatory 2016-03-29 12:18:52 -07:00
Andy Eschbacher
2e1b598b4f pylinting changes 2016-03-25 22:49:29 -04:00
Andy Eschbacher
d398494720 add test case for markov use of functions 2016-03-24 11:34:59 -04:00
Andy Eschbacher
fbc30f1224 add working version 2016-03-24 11:34:28 -04:00
Andy Eschbacher
98c2b11935 update output signature 2016-03-24 11:33:47 -04:00
Andy Eschbacher
491577ed62 formated markov sql file a bit 2016-03-24 08:19:11 -04:00
Andy Eschbacher
68e5e0892c update signature used in plpython function 2016-03-23 20:46:19 -04:00
Andy Eschbacher
c5a58f97ec add types to arrays 2016-03-23 15:33:54 -04:00
Andy Eschbacher
42e760b5d1 adding passing tests 2016-03-23 14:50:52 -04:00
Andy Eschbacher
cfb40ddecd fixes test for moran 2016-03-23 13:01:56 -04:00
Andy Eschbacher
f3673d6f89 updating test for moran output 2016-03-23 12:41:15 -04:00
Andy Eschbacher
c488900c8c adding markov python code 2016-03-23 12:39:51 -04:00
Andy Eschbacher
b889416947 adding markov functionality 2016-03-23 12:38:44 -04:00
Andy Eschbacher
58cf210e96 fixes test to acomm markov 2016-03-23 12:37:23 -04:00
Andy Eschbacher
1e16b7839b update methods to acomm markov 2016-03-23 12:35:39 -04:00
Andy Eschbacher
eecbe39547 updating tests 2016-03-22 10:42:44 -04:00
Andy Eschbacher
1578b17eb8 updated function flow without significance 2016-03-22 10:42:06 -04:00
Andy Eschbacher
3eda8ecd16 new signatures for moran (w/o significance) 2016-03-22 10:34:22 -04:00
Andy Eschbacher
9b32918746 fixing cluster query tests 2016-03-21 09:50:57 -04:00
Andy Eschbacher
0aa4d0a50e typo fixes, linking, etc. 2016-03-21 08:51:10 -04:00
Raul Ochoa
58c141d217 Allow to pass free queries as select * from table limit 100 in moran 2016-03-16 19:40:06 +01:00
Javier Goizueta
5a7d3178dd Release 0.0.2 
This version is the first with the new versioning approach
which uses separate per-version Pyhton virtual enironments.
 2016-03-16 19:22:21 +01:00
Javier Goizueta
689ec8a925 Change version function from IMMUTABLE to STABLE 
These functions' results will change when the extension
is updated.
 2016-03-16 17:09:50 +01:00
Javier Goizueta
a7e42e93cc Rename cdb_crankshaft_internal_version as internal function 2016-03-16 16:41:54 +01:00
Javier Goizueta
bad09ffd7b Remove abandoned alternatives from the documentation 2016-03-16 16:30:03 +01:00
Javier Goizueta
dea6e2f1a7 Refactor the Makefile 
Separate concerns properly for each subdirectory's Makefile
 2016-03-16 15:40:40 +01:00
Javier Goizueta
d13f167d47 Add RELEASE_VERSION option to make deploy 
Now make deploy installs by default the current version,
but can be made to install any prior specific version using
a environmnt varialbe RELEASE_VERSION
 2016-03-16 14:38:18 +01:00
Javier Goizueta
a518034e65 Fix .pyc files need not only be ignored inside src/py 2016-03-16 11:13:26 +01:00
Javier Goizueta
24e4037995 Fix version number of released extension script 2016-03-16 11:11:16 +01:00
Javier Goizueta
82a738fe40 Fix make clean tasks 2016-03-16 10:18:07 +01:00
Javier Goizueta
e801c9cb60 Release tasks using release-specific virtual environments 
Refine the development process and define the procedure for
releasing new versions.
 2016-03-15 18:48:46 +01:00
Javier Goizueta
0206cc6c44 Update documentation 2016-03-10 19:13:46 +01:00
Rafa de la Torre
b754ffe42a Add info about python dependencies 2016-03-10 18:06:21 +01:00
Javier Goizueta
0056f411b5 Set the path to virtualenvs in the Makefile 
Also, version the virtualenv
 2016-03-09 19:04:21 +01:00
Javier Goizueta
1810f02242 Use SciPy from system package python-scipy 2016-03-09 15:03:17 +01:00
Javier Goizueta
8e972128eb Modify sql code to user the python virtualenv 2016-03-09 15:00:50 +01:00
Javier Goizueta
cdd2d9e722 Directory reorganization and sketch of new versioning procedure 2016-03-08 19:35:02 +01:00