adding silhouette

This commit is contained in:
Andy Eschbacher 2016-11-15 00:15:23 +01:00
parent 64c4b6611c
commit b6dae5e380

View File

@ -41,6 +41,8 @@ def kmeans_nonspatial(query, colnames, num_clusters=5,
id_col (string): name of the input id_column
"""
import json
from sklearn import metrics
out_id_colname = 'rowids'
# TODO: need a random seed?
@ -70,7 +72,13 @@ def kmeans_nonspatial(query, colnames, num_clusters=5,
kmeans = KMeans(n_clusters=num_clusters,
random_state=0).fit(cluster_columns)
centers = [json.dumps(dict(zip(colnames, c))) for c in kmeans.cluster_centers_[kmeans.labels_]]
centers = [json.dumps(dict(zip(colnames, c)))
for c in kmeans.cluster_centers_[kmeans.labels_]]
silhouettes = metrics.silhouette_samples(cluster_columns,
labels,
metric='sqeuclidean')
return zip(kmeans.labels_,
centers,
db_resp[0][out_id_colname])