Fixed build warning due to auto_ptr<>
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2b9c501e18
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fbe4e1cf2f
@ -845,163 +845,160 @@ class ReaderWriterDICOM : public osgDB::ReaderWriter
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{
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FileInfo& fileInfo = ditr->second;
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std::auto_ptr<DicomImage> dcmImage(new DicomImage(fileInfo.filename.c_str()));
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if (dcmImage.get())
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DicomImage dcmImage(fileInfo.filename.c_str());
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if (dcmImage.getStatus()==EIS_Normal)
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{
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if (dcmImage->getStatus()==EIS_Normal)
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EP_Representation curr_pixelRep;
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int curr_numPlanes;
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GLenum curr_pixelFormat;
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GLenum curr_dataType;
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unsigned int curr_pixelSize;
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// get the pixel data
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const DiPixel* pixelData = dcmImage.getInterData();
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if(!pixelData)
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{
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warning()<<"Error: no data in DicomImage object."<<std::endl;
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return ReadResult::ERROR_IN_READING_FILE;
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}
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EP_Representation curr_pixelRep;
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int curr_numPlanes;
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GLenum curr_pixelFormat;
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GLenum curr_dataType;
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unsigned int curr_pixelSize;
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// create the new image
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convertPixelTypes(pixelData,
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curr_pixelRep, curr_numPlanes,
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curr_dataType, curr_pixelFormat, curr_pixelSize);
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// get the pixel data
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const DiPixel* pixelData = dcmImage->getInterData();
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if(!pixelData)
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{
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warning()<<"Error: no data in DicomImage object."<<std::endl;
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return ReadResult::ERROR_IN_READING_FILE;
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}
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// dcmImage.getFrameCount()
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// create the new image
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convertPixelTypes(pixelData,
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curr_pixelRep, curr_numPlanes,
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curr_dataType, curr_pixelFormat, curr_pixelSize);
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osg::ref_ptr<osg::Image> imageAdapter = new osg::Image;
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// dcmImage->getFrameCount()
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if (dcmImage.isMonochrome())
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{
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imageAdapter->setImage(dcmImage.getWidth(), dcmImage.getHeight(), dcmImage.getFrameCount(),
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curr_pixelFormat,
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curr_pixelFormat,
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curr_dataType,
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(unsigned char*)(pixelData->getData()),
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osg::Image::NO_DELETE);
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osg::ref_ptr<osg::Image> imageAdapter = new osg::Image;
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if (dcmImage->isMonochrome())
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{
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imageAdapter->setImage(dcmImage->getWidth(), dcmImage->getHeight(), dcmImage->getFrameCount(),
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curr_pixelFormat,
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curr_pixelFormat,
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curr_dataType,
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(unsigned char*)(pixelData->getData()),
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osg::Image::NO_DELETE);
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}
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else
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{
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imageAdapter->allocateImage(dcmImage->getWidth(), dcmImage->getHeight(), dcmImage->getFrameCount(),
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curr_pixelFormat, curr_dataType);
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void* data = imageAdapter->data(0,0,0);
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unsigned long size = dcmImage->createWindowsDIB( data,
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imageAdapter->getTotalDataSize(),
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0,
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imageAdapter->getPixelSizeInBits(),
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0,
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0);
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if (size==0)
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{
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info()<<" dcmImage->createWindowsDIB() failed to create required imagery."<<std::endl;
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continue;
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}
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}
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if (!image)
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{
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pixelRep = curr_pixelRep;
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numPlanes = curr_numPlanes;
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dataType = curr_dataType;
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pixelFormat = curr_pixelFormat;
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pixelSize = curr_pixelSize;
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osg::RefMatrix* matrix = details->getMatrix();
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(*matrix)(0,0) = fileInfo.dirX.x();
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(*matrix)(1,0) = fileInfo.dirX.y();
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(*matrix)(2,0) = fileInfo.dirX.z();
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(*matrix)(0,1) = fileInfo.dirY.x();
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(*matrix)(1,1) = fileInfo.dirY.y();
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(*matrix)(2,1) = fileInfo.dirY.z();
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(*matrix)(0,2) = fileInfo.dirZ.x();
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(*matrix)(1,2) = fileInfo.dirZ.y();
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(*matrix)(2,2) = fileInfo.dirZ.z();
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matrix->preMultScale(osg::Vec3d(
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fileInfo.pixelSize_x * dcmImage->getWidth(),
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fileInfo.pixelSize_y * dcmImage->getHeight(),
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averageThickness * totalNumSlices));
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(*matrix)(3,0) = fileInfo.position.x();
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(*matrix)(3,1) = fileInfo.position.y();
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(*matrix)(3,2) = fileInfo.position.z();
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(*matrix)(3,3) = 1.0;
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// note from Robert Osfield, testing various dicom files I have found that the rescaleIntercept
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// for CT data doesn't look to be applicable as an straight value offset, so we'll ignore for now.
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// details->setTexelOffset(fileInfo.rescaleIntercept);
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double s = fileInfo.rescaleSlope;
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switch(dataType)
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{
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case(GL_BYTE): s *= 128.0; break;
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case(GL_UNSIGNED_BYTE): s *= 255.0; break;
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case(GL_SHORT): s *= 32768.0; break;
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case(GL_UNSIGNED_SHORT): s *= 65535.0; break;
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case(GL_INT): s *= 2147483648.0; break;
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case(GL_UNSIGNED_INT): s *= 4294967295.0; break;
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default: break;
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}
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details->setTexelScale(osg::Vec4(s,s,s,s));
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image = new osg::Image;
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image->setUserData(details.get());
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image->setFileName(fileName.c_str());
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image->allocateImage(dcmImage->getWidth(), dcmImage->getHeight(), totalNumSlices,
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pixelFormat, dataType);
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//matrix->preMult(osg::Matrix::scale(double(image->s()), double(image->t()), double(image->r())));
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info()<<"Image dimensions = "<<image->s()<<", "<<image->t()<<", "<<image->r()<<" pixelFormat=0x"<<std::hex<<pixelFormat<<" dataType=0x"<<std::hex<<dataType<<std::dec<<std::endl;
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}
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else if (pixelData->getPlanes()>numPlanes ||
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pixelData->getRepresentation()>pixelRep)
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{
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info()<<"Need to reallocated "<<image->s()<<", "<<image->t()<<", "<<image->r()<<std::endl;
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// record the previous image settings to use when we copy back the content.
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osg::ref_ptr<osg::Image> previous_image = image;
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// create the new image
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convertPixelTypes(pixelData,
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pixelRep, numPlanes,
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dataType, pixelFormat, pixelSize);
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image = new osg::Image;
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image->setUserData(previous_image->getUserData());
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image->setFileName(fileName.c_str());
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image->allocateImage(dcmImage->getWidth(), dcmImage->getHeight(), totalNumSlices,
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pixelFormat, dataType);
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osg::copyImage(previous_image.get(), 0,0,0, previous_image->s(), previous_image->t(), imageNum,
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image.get(), 0, 0, 0,
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false);
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}
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info()<<"copyImage(, fileInfo.distance"<<fileInfo.distance<<", imageNum="<<imageNum<<std::endl;
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osg::copyImage(imageAdapter.get(), 0,0,0, imageAdapter->s(), imageAdapter->t(), imageAdapter->r(),
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image.get(), 0, 0, imageNum,
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false);
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imageNum += dcmImage->getFrameCount();
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}
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else
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{
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warning()<<"Error in reading dicom file "<<fileInfo.filename<<", error = "<<DicomImage::getString(dcmImage->getStatus())<<std::endl;
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info()<<" dcmImage->getPhotometricInterpretation()="<<DicomImage::getString(dcmImage->getPhotometricInterpretation())<<std::endl;
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info()<<" dcmImage->width="<<dcmImage->getWidth()<<", height="<<dcmImage->getHeight()<<" FrameCount="<< dcmImage->getFrameCount()<<std::endl;
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imageAdapter->allocateImage(dcmImage.getWidth(), dcmImage.getHeight(), dcmImage.getFrameCount(),
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curr_pixelFormat, curr_dataType);
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void* data = imageAdapter->data(0,0,0);
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unsigned long size = dcmImage.createWindowsDIB( data,
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imageAdapter->getTotalDataSize(),
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0,
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imageAdapter->getPixelSizeInBits(),
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0,
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0);
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if (size==0)
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{
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info()<<" dcmImage.createWindowsDIB() failed to create required imagery."<<std::endl;
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continue;
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}
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}
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if (!image)
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{
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pixelRep = curr_pixelRep;
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numPlanes = curr_numPlanes;
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dataType = curr_dataType;
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pixelFormat = curr_pixelFormat;
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pixelSize = curr_pixelSize;
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osg::RefMatrix* matrix = details->getMatrix();
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(*matrix)(0,0) = fileInfo.dirX.x();
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(*matrix)(1,0) = fileInfo.dirX.y();
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(*matrix)(2,0) = fileInfo.dirX.z();
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(*matrix)(0,1) = fileInfo.dirY.x();
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(*matrix)(1,1) = fileInfo.dirY.y();
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(*matrix)(2,1) = fileInfo.dirY.z();
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(*matrix)(0,2) = fileInfo.dirZ.x();
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(*matrix)(1,2) = fileInfo.dirZ.y();
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(*matrix)(2,2) = fileInfo.dirZ.z();
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matrix->preMultScale(osg::Vec3d(
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fileInfo.pixelSize_x * dcmImage.getWidth(),
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fileInfo.pixelSize_y * dcmImage.getHeight(),
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averageThickness * totalNumSlices));
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(*matrix)(3,0) = fileInfo.position.x();
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(*matrix)(3,1) = fileInfo.position.y();
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(*matrix)(3,2) = fileInfo.position.z();
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(*matrix)(3,3) = 1.0;
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// note from Robert Osfield, testing various dicom files I have found that the rescaleIntercept
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// for CT data doesn't look to be applicable as an straight value offset, so we'll ignore for now.
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// details->setTexelOffset(fileInfo.rescaleIntercept);
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double s = fileInfo.rescaleSlope;
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switch(dataType)
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{
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case(GL_BYTE): s *= 128.0; break;
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case(GL_UNSIGNED_BYTE): s *= 255.0; break;
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case(GL_SHORT): s *= 32768.0; break;
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case(GL_UNSIGNED_SHORT): s *= 65535.0; break;
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case(GL_INT): s *= 2147483648.0; break;
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case(GL_UNSIGNED_INT): s *= 4294967295.0; break;
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default: break;
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}
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details->setTexelScale(osg::Vec4(s,s,s,s));
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image = new osg::Image;
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image->setUserData(details.get());
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image->setFileName(fileName.c_str());
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image->allocateImage(dcmImage.getWidth(), dcmImage.getHeight(), totalNumSlices,
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pixelFormat, dataType);
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//matrix->preMult(osg::Matrix::scale(double(image->s()), double(image->t()), double(image->r())));
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info()<<"Image dimensions = "<<image->s()<<", "<<image->t()<<", "<<image->r()<<" pixelFormat=0x"<<std::hex<<pixelFormat<<" dataType=0x"<<std::hex<<dataType<<std::dec<<std::endl;
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}
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else if (pixelData->getPlanes()>numPlanes ||
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pixelData->getRepresentation()>pixelRep)
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{
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info()<<"Need to reallocated "<<image->s()<<", "<<image->t()<<", "<<image->r()<<std::endl;
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// record the previous image settings to use when we copy back the content.
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osg::ref_ptr<osg::Image> previous_image = image;
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// create the new image
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convertPixelTypes(pixelData,
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pixelRep, numPlanes,
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dataType, pixelFormat, pixelSize);
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image = new osg::Image;
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image->setUserData(previous_image->getUserData());
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image->setFileName(fileName.c_str());
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image->allocateImage(dcmImage.getWidth(), dcmImage.getHeight(), totalNumSlices,
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pixelFormat, dataType);
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osg::copyImage(previous_image.get(), 0,0,0, previous_image->s(), previous_image->t(), imageNum,
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image.get(), 0, 0, 0,
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false);
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}
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info()<<"copyImage(, fileInfo.distance"<<fileInfo.distance<<", imageNum="<<imageNum<<std::endl;
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osg::copyImage(imageAdapter.get(), 0,0,0, imageAdapter->s(), imageAdapter->t(), imageAdapter->r(),
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image.get(), 0, 0, imageNum,
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false);
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imageNum += dcmImage.getFrameCount();
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}
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else
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{
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warning()<<"Error in reading dicom file "<<fileInfo.filename<<", error = "<<DicomImage::getString(dcmImage.getStatus())<<std::endl;
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info()<<" dcmImage.getPhotometricInterpretation()="<<DicomImage::getString(dcmImage.getPhotometricInterpretation())<<std::endl;
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info()<<" dcmImage.width="<<dcmImage.getWidth()<<", height="<<dcmImage.getHeight()<<" FrameCount="<< dcmImage.getFrameCount()<<std::endl;
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}
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}
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